Eubacterium callanderi G14 DSM 107592 Nanopore raw reads - SRA

SRX22878451: Eubacterium callanderi G14 DSM 107592 Nanopore raw reads
1 OXFORD_NANOPORE (MinION) run: 103,110 spots, 782.2M bases, 647.9Mb downloads

Design: library was prepared using the Ligation Sequencing kit SQK-LSK109 and Native barcode kit EXP-NBD104 (BC 3) and sequenced on a MinION

Submitted by: Georg-August-University Goettingen

Study: Eubacterium callanderi Genome sequencing and assembly

PRJNA1001322 • SRP477768 • All experiments • All runs

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In study related to this BioProject we examined genomic, phylogenetic, and physiologic features of Eubacterium limosum and 11 closely related strains. The genomes of the following eubacterial strains FD (DSM 3662T), Marburg (DSM 3468), 2A (DSM 2593), 11A (DSM 2594), G14 (DSM 107592), and 32 (DSM 20517) were sequenced and subsequently compared with previously available genomes of the E. limosum type strain, as well as the strains B2, KIST612, YI (DSM 105863T), and SA11. This comparison revealed a close relationship of all eleven eubacterial strains, forming three distinct clades: E. limosum, E. callanderi, and E. maltosivorans.

Sample: Microbe sample from Eubacterium callanderi

SAMN36807651 • SRS19851085 • All experiments • All runs

Organism: Eubacterium callanderi

Library:

Name: EUBA_n_3

Instrument: MinION

Strategy: WGS

Source: GENOMIC

Selection: RANDOM

Layout: SINGLE

Runs: 1 run, 103,110 spots, 782.2M bases, 647.9Mb

Run	# of Spots	# of Bases	Size	Published
SRR27198384	103,110	782.2M	647.9Mb	2023-12-13

ID:: 30934992

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